Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAACCACAGCCATTTCTCTGCAC
.((((((((.((((((.(((.&))).)))))).))))........)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256239
GeneSymbolPGAP2
Binding site1220,1248
Score1.0
Seed1
Au0.5
Energy-21.3
Binding len28
Me-5.036
Phylopstem0.23527168499999992
Phylopflank0.28655420100000006
Longest consecutive pairings6
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure