Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTGTGCGACGAGTTTCAGCTGGCCAAGAAAGGAGTCAAGTT
.(((((((((((((((((((((&)))))))........................)))))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330672
GeneSymbolLIMCH1
Binding site6064,6111
Score0.846
Seed1
Au0.574
Energy-26.6
Binding len47
Me-3.793
Phylopstem0.6433424836956523
Phylopflank0.34598029124999996
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure