Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCAGTCTCAGCTGA
...((((((.((((((((((.&)))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256267
GeneSymbolMYPN
Binding site4412,4430
Score0.923
Seed0
Au0.529
Energy-20.0
Binding len18
Me-7.757
Phylopstem1.0077789000000001
Phylopflank0.566112676875
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure