Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTCAGGGCGCCCTGCAAGGCCGCAGGCAGG
((((..(((((((((((.(((&.))).))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256276
GeneSymbolRAB34
Binding site170,205
Score0.846
Seed0
Au0.309
Energy-21.5
Binding len23
Me-9.958
Phylopstem0.3921161607692308
Phylopflank0.4443462215
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure