Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAGGCGGCAGCTGGAGA
((.(((((((.((..((((((&)))))).)).))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256293
GeneSymbolKRT8
Binding site628,649
Score0.846
Seed0
Au0.426
Energy-24.0
Binding len21
Me-9.912
Phylopstem0.7788171142857142
Phylopflank3.1003125775000004
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure