Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTTCTTCTGTCAGCTGCC
..((((((((((..(.(((((&))))).)..))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256301
GeneSymbolHPGD
Binding site146,167
Score0.846
Seed1
Au0.515
Energy-19.7
Binding len21
Me-7.336
Phylopstem0.48902229090909094
Phylopflank0.2872036075
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure