Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACCGCCCGCCCCAGCAGTGGCTGCAC
.(((((((((.((((...(((&.))).)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256306
GeneSymbolHPGD
Binding site6,36
Score0.846
Seed1
Au0.292
Energy-21.5
Binding len20
Me-6.851
Phylopstem0.3470940666666667
Phylopflank-0.5680952775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure