Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCACAACTGTAAA
((((((.((.((((((..(((&))))))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256306
GeneSymbolHPGD
Binding site1567,1587
Score0.846
Seed0
Au0.647
Energy-18.8
Binding len20
Me-6.724
Phylopstem-0.10402766666666668
Phylopflank0.15162697374999995
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure