Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGCTGCACTCACTTCCTTC&GGAATGAATTGCAGCCACC
(((((((((.(((.((((...&)))))))..))))))))).
Details
MiRNAhsa-miR-647
RefseqIDNM_001330413
GeneSymbolBCAS3
Binding site2053,2072
Score1.0
Seed1
Au0.5
Energy-23.3
Binding len19
Me-6.037
Phylopstem0.8372378422222222
Phylopflank1.1311193775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure