Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTGTCAGCTGCAT
.(((((((((((.........&))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256313
GeneSymbolSTK3
Binding site1519,1532
Score0.923
Seed1
Au0.662
Energy-17.2
Binding len13
Me-6.908
Phylopstem3.4451695
Phylopflank5.10669733125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure