Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATTTGCATTTATGCCAA
...(((((((.((((((((((.&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256314
GeneSymbolSLC5A1
Binding site3563,3581
Score0.923
Seed0
Au0.632
Energy-18.3
Binding len18
Me-9.339
Phylopstem0.47486930000000005
Phylopflank0.25060548625
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure