Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGTACCTACTGGAGCTGCAGA
((((((((.((((.(((((((&)))).)))..)))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256314
GeneSymbolSLC5A1
Binding site2197,2221
Score0.846
Seed1
Au0.5
Energy-22.0
Binding len24
Me-5.851
Phylopstem0.07486475000000001
Phylopflank0.12921710275000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure