Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGCTGCACTCACTTCCTTC&AAGCTTAGTGACAGCAGCCGCC
((((((((..(((((......&.)))))..)))))))).
Details
MiRNAhsa-miR-647
RefseqIDNM_001330413
GeneSymbolBCAS3
Binding site3036,3058
Score1.0
Seed1
Au0.441
Energy-21.9
Binding len17
Me-6.47
Phylopstem5.3750303875
Phylopflank4.107506363749998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure