Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGACCAGCTCAC
.((.(((((.(..((((((((&))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256316
GeneSymbolCHST9
Binding site4013,4032
Score1.0
Seed0
Au0.544
Energy-19.9
Binding len19
Me-12.704
Phylopstem-0.24174778125000002
Phylopflank-0.20206309999999997
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure