Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGAGCCAGGA
.((((((.((((..........&)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256317
GeneSymbolTMPRSS3
Binding site12,24
Score0.923
Seed1
Au0.453
Energy-16.2
Binding len12
Me-9.221
Phylopstem-0.25820333333333334
Phylopflank-0.5424092365714286
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure