Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAAGCAGCTGCC
..((((((((..(((((((..&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256338
GeneSymbolCHD1L
Binding site751,767
Score0.923
Seed1
Au0.515
Energy-22.8
Binding len16
Me-11.129
Phylopstem3.3744690000000004
Phylopflank4.70148958875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure