Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAAACTGCAGCTCAC
.((.((((((((((...((((&))))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256338
GeneSymbolCHD1L
Binding site857,877
Score1.0
Seed0
Au0.574
Energy-21.5
Binding len20
Me-7.794
Phylopstem4.3462604
Phylopflank3.3047468000000007
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure