Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCCCGGGGAGGCCGAGACGCTGGCAGAGACCGAGCCAGAAAGGCACTTGGGGTCTT
(((((((((.((((((((.((&))...))))))))......))............................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001256339
GeneSymbolNKX3-1
Binding site22,79
Score0.846
Seed1
Au0.456
Energy-21.9
Binding len57
Me-5.18
Phylopstem1.3363468648648649
Phylopflank0.8208812117056451
Longest consecutive pairings8
Position of longest consecutive pairings44
Pairings in 3prime end7
PositionCDS
2D Structure