Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGGGCCGGGCCAGGAGAATCTCCGCTTGTCCAAGACAGGGGCCTAAGGAGGGTCTC
((((((((((((((((((...&)))))))).....................)))...................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001256339
GeneSymbolNKX3-1
Binding site1202,1261
Score0.846
Seed1
Au0.441
Energy-21.8
Binding len59
Me-3.938
Phylopstem0.3095320068965517
Phylopflank0.41789453249999997
Longest consecutive pairings8
Position of longest consecutive pairings51
Pairings in 3prime end5
Position3UTR
2D Structure