Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACGCCGTGGCTGCC
..(((((((((((....(((.&)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256346
GeneSymbolSEMA5B
Binding site2824,2843
Score1.0
Seed1
Au0.25
Energy-23.5
Binding len19
Me-6.782
Phylopstem1.5734243636363636
Phylopflank4.209672102500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure