Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCGAACAGCCCTGGCTGCT
..(((((((.((((((..(.(&).)..)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256356
GeneSymbolUBE2L3
Binding site2527,2547
Score0.846
Seed1
Au0.412
Energy-19.3
Binding len20
Me-6.2
Phylopstem0.5709464285714286
Phylopflank0.34089465249999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure