Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGTACAACTGCAGGTA
....(.(((((((((((((((&))))..))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256378
GeneSymbolMCMBP
Binding site3249,3269
Score1.0
Seed0
Au0.588
Energy-21.0
Binding len20
Me-11.448
Phylopstem4.656391033529412
Phylopflank3.5424425250000007
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end8
Position3UTR
2D Structure