Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGAATTGGAGACCAGC
..(((((((((((((((((...&)))))))))..)))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001363556
GeneSymbolPAAF1
Binding site4622,4643
Score0.846
Seed1
Au0.441
Energy-25.8
Binding len21
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end5
Position3UTR
2D Structure