Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATACTATAGAAAGAATGCAAAATCTACATACGTTATGGCTGCAAC
(((((((((((..(((.((((&.)))))))..)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256385
GeneSymbolLRRC39
Binding site899,948
Score1.0
Seed1
Au0.647
Energy-20.3
Binding len25
Me-8.574
Phylopstem4.9711229999999995
Phylopflank3.290846823749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure