Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATACTATAGAAAGAATGCAAAATCTACATACGTTATGGCTGCAAC
(((((((((((..(((.((((&.)))))))..)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256387
GeneSymbolLRRC39
Binding site842,891
Score1.0
Seed1
Au0.647
Energy-20.3
Binding len25
Me-8.574
Phylopstem3.657665142857142
Phylopflank3.3074740549999992
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure