Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAAACCCCCGAAAAGTGGTTGGCTGCAGTTGTGCAGTAGTTAAGGACTAGGTCA
.((((((((((((...((((.&.))))..)))))))).....................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001256400
GeneSymbolBCO2
Binding site2277,2333
Score0.846
Seed1
Au0.574
Energy-24.4
Binding len41
Me-5.619
Phylopstem2.9412519606060603
Phylopflank2.3909924364999995
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end4
Position3UTR
2D Structure