Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCAGTTGTG
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256400
GeneSymbolBCO2
Binding site2299,2312
Score1.0
Seed1
Au0.515
Energy-18.2
Binding len13
Me-5.925
Phylopstem3.63093025
Phylopflank2.339600237625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure