Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCATGGTTTTGTAATTGCTAAGGCATGATATGTCAGGTT
((((((((((..((((......&.))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256403
GeneSymbolPRELID3B
Binding site1374,1416
Score0.923
Seed1
Au0.735
Energy-18.5
Binding len18
Me-10.109
Phylopstem0.60224875
Phylopflank0.47627718375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure