Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGCTTCAGCAATGGTGTCTTCATCCTCGCAGCCTGAAGCTGCT
..((((((..((((((.(((.&.))).))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256404
GeneSymbolDENND2C
Binding site6000,6048
Score0.923
Seed1
Au0.529
Energy-23.2
Binding len21
Me-7.256
Phylopstem0.2827957833333334
Phylopflank0.12942699124999998
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure