Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAAAACTGTGTAAGTTGTAT
.((((((((((((((((((((&))))))))..)))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256404
GeneSymbolDENND2C
Binding site5660,5686
Score0.923
Seed1
Au0.721
Energy-20.8
Binding len26
Me-3.793
Phylopstem0.612871476
Phylopflank0.4023703350000001
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure