Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGATGAGCGCTTCAAACGGCGGCAGTTGCTGCGGCTGCAGG
((((((((((((((((.....&.)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256405
GeneSymbolKDM2A
Binding site1131,1176
Score1.0
Seed1
Au0.382
Energy-23.8
Binding len21
Me-3.938
Phylopstem2.673463526315789
Phylopflank2.5854507694999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure