Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACAATTGCTAGTTGTAT
.(((((((((((((((..(((&)))..)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256413
GeneSymbolHVCN1
Binding site1207,1229
Score0.923
Seed1
Au0.676
Energy-20.8
Binding len22
Me-3.793
Phylopstem4.2930504375
Phylopflank3.21155903
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure