Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAAAATGCATACATACATAATTTATTGAGTGCCTACTGTGTGCTAGGTA
((((((((((((..((((....&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256414
GeneSymbolGNAI1
Binding site7913,7962
Score0.846
Seed1
Au0.618
Energy-22.8
Binding len18
Me-6.084
Phylopstem-0.05844629999999993
Phylopflank-0.17964586750000006
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure