Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTGCACAGTGTAACAGCGCAGTTGCAT
.(((((((((.(((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256418
GeneSymbolATPAF1
Binding site1329,1359
Score0.923
Seed1
Au0.544
Energy-21.0
Binding len16
Me-6.618
Phylopstem1.361079
Phylopflank1.4610471660000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure