Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAATGTCAGACCCAGCTGCT
..(((((((.((((...(((.&)))........))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256418
GeneSymbolATPAF1
Binding site225,248
Score0.923
Seed1
Au0.515
Energy-19.6
Binding len23
Me-7.168
Phylopstem0.3088811857142857
Phylopflank0.5113240125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure