Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCACAGCAAAGCTTGGACTTGCAGCTTGCTTGCTGCAT
.((((((.(((((((((((..&.))))))))).))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256423
GeneSymbolARHGAP19
Binding site1546,1586
Score0.846
Seed1
Au0.544
Energy-24.2
Binding len22
Me-6.107
Phylopstem0.5023706166666668
Phylopflank0.39643521375000007
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure