Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGGAGCCCAGCCCGGCCGCAGCTGCC
..(((((((((((((...(((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256424
GeneSymbolGUCY1A2
Binding site552,583
Score0.846
Seed1
Au0.103
Energy-27.8
Binding len18
Me-5.19
Phylopstem1.4489784615384615
Phylopflank1.7417788495
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure