Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGGTTTCCGGCTGCAGG
(((((((((.((((.(((((.&))))).))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256429
GeneSymbolPDLIM5
Binding site132,154
Score0.821
Seed1
Au0.412
Energy-19.8
Binding len22
Me-5.916
Phylopstem5.231438444444445
Phylopflank3.8817061725000004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure