Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATAACTGTGCTGTG
..(((((.(((((((((....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256429
GeneSymbolPDLIM5
Binding site852,867
Score0.923
Seed0
Au0.588
Energy-17.0
Binding len15
Me-7.271
Phylopstem-0.1718896555555555
Phylopflank0.153666358875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure