Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGGCTTGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGTATGCCGGGG
.((((((((((..(((((((..&.)))).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256440
GeneSymbolC19orf47
Binding site834,893
Score0.846
Seed1
Au0.397
Energy-22.1
Binding len20
Me-8.429
Phylopstem4.3477833
Phylopflank1.8617319224999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure