Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGACTTGCCCAGCTGCC
..(((((((.(((.....(((&))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363562
GeneSymbolTMEM196
Binding site1401,1420
Score0.923
Seed1
Au0.426
Energy-20.6
Binding len19
Me-8.025
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure