Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTTTACAGCTTCTGTCCTGCTCCTGCATCTTGCCAGGC
.(((((((....((((((....&.))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256443
GeneSymbolPRRT2
Binding site1939,1977
Score0.846
Seed1
Au0.441
Energy-19.6
Binding len17
Me-12.264
Phylopstem0.9867955714285713
Phylopflank1.1660088325
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure