Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACGACCGCTTGCTGGAGGAGCACGCAAAGCTGCAGG
(((((((((((((((((....&)))))))))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256447
GeneSymbolBCAP31
Binding site764,801
Score1.0
Seed1
Au0.426
Energy-23.7
Binding len37
Me-3.938
Phylopstem4.015087638888889
Phylopflank3.9364670574999994
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end4
PositionCDS
2D Structure