Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCAAACTGCAGCAGTT
..((.((((((((((((((((&)))))))..))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256469
GeneSymbolKAT6B
Binding site5084,5106
Score0.846
Seed0
Au0.544
Energy-23.6
Binding len22
Me-9.076
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure