Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTATATTGTCTGTCACAAGATGAAGGTA
((((((((.(((((((((((((&))))))))))))).))))).........))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256470
GeneSymbolPLEKHA5
Binding site2208,2240
Score0.846
Seed1
Au0.632
Energy-19.5
Binding len32
Me-4.994
Phylopstem1.5987623076923079
Phylopflank4.2336730875000015
Longest consecutive pairings13
Position of longest consecutive pairings19
Pairings in 3prime end8
PositionCDS
2D Structure