Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATTTGAAATTGGGGCTGTT
..((((((.((((((((((((&)))))))....))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001363563
GeneSymbolHTR3B
Binding site3914,3938
Score0.846
Seed1
Au0.632
Energy-19.8
Binding len24
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure