Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGCGATGGCGGCTGCGC
.(((((((((.(((((..(((&)))..))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256494
GeneSymbolMAN2C1
Binding site16,37
Score0.846
Seed1
Au0.288
Energy-26.5
Binding len21
Me-6.618
Phylopstem-0.3009292888888889
Phylopflank-0.12322357977941177
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure