Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCCCTGTGTGCTGGGG
.(((((((((((..((......&))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001256495
GeneSymbolMAN2C1
Binding site1860,1876
Score0.846
Seed1
Au0.309
Energy-17.7
Binding len16
Me-5.939
Phylopstem2.683785090909091
Phylopflank4.151765095
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure