Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGTTCCTATACCCAGCAGCCCAGCTGCAGC
(((((((((.((((((..(((&.)))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256495
GeneSymbolMAN2C1
Binding site1686,1720
Score1.0
Seed1
Au0.397
Energy-27.9
Binding len22
Me-5.18
Phylopstem3.474671733333333
Phylopflank2.4944188499999997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure