Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAGACACTGGGAGCCCTTCGAGCCATCCCCCCCGCGCAGCTGCAGG
((((((((((((((..((((.&.))))..))))...........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001256508
GeneSymbolTBC1D10C
Binding site769,819
Score0.846
Seed1
Au0.324
Energy-25.3
Binding len33
Me-4.906
Phylopstem1.6098336999999998
Phylopflank1.39453175875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure